Change 11796

Russell C. Jackson (Rusty)
Changed the chmod 750 so that it doesn't run over all the existing instances.
 That would make it horribly slow to create additional instances in an existing
 installation with a lot of files.

 Added variable to define the master instance, and then used that for making
 links to the license file and ssl dir in the master instance. This fixed a bug
 where we were checking for instance 1 for linking the license file. We cannot
 make that assumption when supporting named instances.
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